IBM1081 - Métodos da Bioinformática (2018)

Homework is due in 2 weeks from today and there’s two parts. First part is generating plots from the first 3 lectures. The other half involves bioinformatics analysis. The dataset has ~38 patients and ~28000 data sets. Need to find the outlier(s). The code is done in the first 3 lectures.

Second part, you will use the Spellman dataset. You will use the cdc28 and I won’t give the reference you have to find it yourself. I will give you the function to run some of the problem. Question 11, is right from lecture 3 notes. All the codes are in lecture notes. Q14, you need to cluster the genes and you want to determine the like genes and to fill in the missing data.